STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl2750S ribosomal protein L27, chloroplastic. (119 aa)    
Predicted Functional Partners:
rpl31
50S ribosomal protein L31, chloroplastic; Binds the 23S rRNA.
  
 
 0.997
rpl36
50S ribosomal protein L36, chloroplastic.
   
 
 0.997
rpl5
50S ribosomal protein L5, chloroplastic; Binds 5S rRNA, forms part of the central protuberance of the 50S subunit.
  
 
 0.997
rps20
30S ribosomal protein S20, chloroplastic; Binds directly to 16S ribosomal RNA; Belongs to the bacterial ribosomal protein bS20 family.
  
 
 0.997
rps2
30S ribosomal protein S2, chloroplastic.
  
 
 0.997
Esi_0120_0053
Uncharacterized protein.
  
 
 0.997
Esi_0184_0026
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.997
Esi_0033_0018
Putative ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.997
Esi_0073_0071
KH type-2 domain-containing protein.
  
 
 0.997
rps12
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits.
  
 
 0.996
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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