STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0134_0074UBX domain-containing protein. (423 aa)    
Predicted Functional Partners:
Esi_0229_0023
UBX domain-containing protein.
    
 
 0.926
Esi_0211_0012
Uncharacterized protein.
    
 0.857
Esi_0003_0017
UBX domain-containing protein.
    
 0.772
Esi_0667_0002
UBX domain-containing protein.
    
 0.772
Esi_0071_0018
PUB domain, zinc finger protein Thioredoxin.
   
 0.715
ycf46
Uncharacterized protein ycf46.
    
 0.693
cbbX
Chloroplast conserved protein CbbX.
    
 0.693
Esi_0173_0011
EstExt_Genewise1.C_60040.
    
 0.693
Esi_0246_0004
Similar to spermatogenesis associated factor SPAF.
    
 0.693
Esi_0057_0096
Flagellar associated protein; Belongs to the AAA ATPase family.
    
 0.693
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.