STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0162_0059Similar to voltage-dependent calcium channel T-type alpha 1I subunit. (2992 aa)    
Predicted Functional Partners:
Esi_0270_0002
VWFA domain-containing protein.
   
 0.826
WD40-2
WD40 repeat protein flagellar associated protein.
    
 0.821
DAF10
Intraflagellar transport protein 122A intraflagellar transport protein.
   
 0.815
IFT140
Intraflagellar transport protein 140 puative.
    
 0.803
Esi_0122_0007
WD repeat membrane protein.
    
  0.724
Esi_0044_0076
ANAPC4_WD40 domain-containing protein.
    
  0.724
Esi_0304_0029
Uncharacterized protein.
   
 0.716
Esi_0031_0111
K+ transporter, Kef-type.
   
 0.716
Esi_0003_0200
Hypothetical leucine rich repeat protein.
    
 0.698
Esi_0034_0144
Hypothetical leucine rich repeat protein.
    
 0.698
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.