STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0203_0042Rab-GAP TBC domain-containing protein. (834 aa)    
Predicted Functional Partners:
RTW
RTW, Ras superfamily GTPase.
    
 0.707
Rab11B
Rab11B, RAB family GTPase.
    
 0.707
Rab11D
Rab11D, RAB family GTPase.
    
 0.707
Rab11C
Rab11C, RAB family GTPase.
    
 0.707
Rab11A
Rab11A, RAB family GTPase.
    
 0.707
PK-7
Protein kinase 2.
    
 0.670
Esi_0619_0005
Non-specific serine/threonine protein kinase.
    
 0.670
Rab2A
Rab2A, RAB family GTPase.
    
  0.619
RJL
RJL, Ras superfamily GTPase.
    
  0.619
Rab2B
Rab2B, RAB family GTPase.
    
  0.619
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.