STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0295_0043Protein required for ethanol metabolism. (396 aa)    
Predicted Functional Partners:
Esi_0009_0196
Enoyl-CoA hydratase.
   
 
  0.619
Esi_0051_0115
Uncharacterized protein.
    
 0.606
Esi_0002_0040
TPR_REGION domain-containing protein.
     
 0.455
Esi_0257_0011
Uncharacterized protein.
     
 0.453
Esi_0000_0057
Peroxisome biogenesis factor 10.
     
 0.447
Esi_0100_0032
Peroxisomal membrane protein PEX16.
     
 0.445
Esi_0142_0050
Serine type protease, similar to Protease Do-like 1, chloroplast.
    
  0.419
Esi_0002_0146
Uncharacterized protein.
    
  0.419
Esi_0509_0002
PDZ domain-containing protein.
    
  0.419
Esi_0081_0086
Trypsin-like serine protease.
    
  0.419
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.