STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0003_0206Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family. (499 aa)    
Predicted Functional Partners:
P5CS
Delta-1-pyrroline-5-carboxylate synthase.
  
 
 0.936
Esi_0292_0040
Uncharacterized protein.
  
 0.880
Esi_0081_0020
ATP-grasp domain-containing protein.
  
 
 0.868
Esi_0079_0076
Uncharacterized protein.
  
 0.865
Esi_0036_0051
Tryptophan synthase (Alpha / beta chains).
  
 
 0.863
Esi_0060_0108
Tryptophan synthase (Alpha / beta chains).
  
 
 0.863
POX
Proline dehydrogenase.
  
 0.851
AAT
Aspartate aminotransferase.
  
 0.840
OAT-2
Ornithine aminotransferase.
 
 0.826
Esi_0322_0030
Uncharacterized protein.
    
 0.825
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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