STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0320_0010Nucleoside diphosphate kinase. (205 aa)    
Predicted Functional Partners:
rps2
30S ribosomal protein S2, chloroplastic.
  
 0.904
rps12
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits.
  
 0.903
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
  
  0.876
Esi_0110_0002
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.872
Esi_0274_0035
Ribosomal protein S23, component of cytosolic 80S ribosome and 40S small subunit.
  
 0.866
rps10
30S ribosomal protein S10, chloroplastic; Involved in the binding of tRNA to the ribosomes.
  
  0.860
Esi_0164_0028
Ribosomal_S10 domain-containing protein.
  
  0.860
rps7
30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.
  
  0.858
Esi_0046_0090
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
  
  0.858
rps16
30S ribosomal protein S16, chloroplastic.
  
  0.846
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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