STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0334_0018Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. (405 aa)    
Predicted Functional Partners:
Esi_0409_0022
Nucleotide binding protein, putative.
   
 
 0.986
Esi_0365_0013
Uncharacterized protein.
   
 
 0.981
Esi_0088_0044
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
   0.947
Esi_0333_0005
Nop domain-containing protein.
  
 0.945
Esi_0073_0055
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 
 0.941
Esi_0357_0002
Uncharacterized protein.
   
 
 0.940
Esi_0004_0088
Uncharacterized protein.
   
 
 0.937
Esi_0039_0141
RNA binding protein (ISS).
   
 
 0.933
Esi_0212_0009
Uncharacterized protein.
  
 
 0.932
Esi_0087_0016
Uncharacterized protein.
   
 
 0.921
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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