STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCL1Dicer-like 3. (1557 aa)    
Predicted Functional Partners:
AGO1
Argonaute 1.
   
 0.964
rpl27
50S ribosomal protein L27, chloroplastic.
  
 
 0.925
Esi_0210_0032
Uncharacterized protein.
   
 0.917
Esi_0091_0057
Mitochondrial ribosomal protein L46 isoform 2.
   
 
 0.898
Esi_0120_0053
Uncharacterized protein.
   
 
 0.896
Esi_0008_0244
L51_S25_CI-B8 domain-containing protein.
   
 
 0.888
Esi_0000_0053
Uncharacterized protein.
   
 
 0.886
Esi_0264_0010
Uncharacterized protein.
   
 
 0.886
Esi_0150_0070
Uncharacterized protein.
   
   0.880
Esi_0149_0074
Uncharacterized protein.
    
 
 0.872
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.