STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0415_0014BTB domain-containing protein. (498 aa)    
Predicted Functional Partners:
Esi_0002_0184
Hypothetical leucine rich repeat protein.
    
 0.837
Esi_0115_0055
Cytochrome b5 heme-binding domain-containing protein.
    
 0.814
Nia
NAD(P)H-Nitrate reductase.
    
 0.814
Esi_0049_0070
BTB domain-containing protein.
   
0.783
Esi_0002_0181
annotation not available
    
 0.742
Esi_0193_0062
Uncharacterized protein.
    
  0.694
Esi_0047_0121
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.693
Esi_0194_0052
Ankyrin repeat domain 3.
    
 0.685
Esi_0004_0073
Similar to ankyrin 2,3/unc44.
    
 0.685
Esi_0029_0119
annotation not available
    
 0.680
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.