STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0045_0061PsbB mRNA maturation factor Mbb1, chloroplast. (977 aa)    
Predicted Functional Partners:
Esi_0041_0035
Putative: centriole proteome protein [Chlamydomonas reinhardtii].
    
  0.833
Esi_0090_0027
Bardet-Biedl syndrome 9, parathyroid hormone-responsive B1.
    
 0.773
Esi_0003_0200
Hypothetical leucine rich repeat protein.
    
 0.708
Esi_0034_0144
Hypothetical leucine rich repeat protein.
    
 0.708
BBS7
Bardet-Biedl syndrome protein 7.
    
 0.705
Esi_0002_0301
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
   
  0.693
Esi_0347_0011
Acyl-CoA synthetase.
    
 0.669
BBS2
Bardet-Biedl syndrome 2.
    
 0.669
psaC
Photosystem I iron-sulfur center; Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized accepto [...]
    
 
 0.666
APC5
Putative subunit of the Anaphase Promoting Complex.
   
 0.650
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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