STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0000_0219RBR-type E3 ubiquitin transferase. (374 aa)    
Predicted Functional Partners:
Esi_0018_0064
RBR-type E3 ubiquitin transferase.
    
 0.841
Esi_0100_0096
RBR-type E3 ubiquitin transferase.
    
 0.841
Esi_0035_0142
Protein serine/threonine kinase.
    
 0.828
Esi_0017_0158
Survivin.
    
 0.809
Esi_0399_0017
Uncharacterized protein.
    
 0.809
Esi_0000_0354
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.809
Esi_0081_0072
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.809
Esi_0183_0039
SH2 domain containing protein.
   
 0.753
Esi_0021_0105
Uncharacterized protein.
   
 0.753
Esi_0014_0150
SH2 domain containing protein.
   
 0.753
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.