STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBEL1RBEL1, Ras superfamily GTPase. (1210 aa)    
Predicted Functional Partners:
Esi_0060_0119
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.928
Esi_0463_0012
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.927
GDIC1
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.926
Esi_0002_0240
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.925
Esi_0209_0016
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.919
Esi_0905_0002
Uncharacterized protein.
    
 0.915
Esi_0054_0020
Trafficking protein particle complex subunit 2, putative.
    
 0.912
psaD
Photosystem I reaction center subunit II.
   
 
 0.841
Esi_0031_0152
WD_REPEATS_REGION domain-containing protein.
    
 0.838
psaF
Photosystem I subunit III.
   
 
 0.836
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.