STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0013_0113FHA-HIT protein. (484 aa)    
Predicted Functional Partners:
HDH
Histidinol dehydrogenase; Belongs to the histidinol dehydrogenase family.
  
 
 0.958
Esi_0121_0078
PRA-CH domain-containing protein.
  
 
 0.958
HISF
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. Belongs to the HisA/HisF family.
  
 
 0.892
Esi_0008_0107
DNA ligase, putative.
  
 0.882
Esi_0148_0042
DNA ligase.
  
 0.875
HIS8
Histidinol-phosphate transaminase.
  
 
 0.862
Esi_0027_0091
Aminotran_1_2 domain-containing protein.
  
 
 0.862
Esi_0130_0054
Similar to fucokinase.
  
 
 0.841
Esi_0130_0058
Fucokinase domain-containing protein.
  
 
 0.841
Esi_0229_0019
Enkurin domain-containing protein.
    
 0.787
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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