STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0015_0087DRIM domain-containing protein. (3622 aa)    
Predicted Functional Partners:
Esi_0125_0072
BP28CT domain-containing protein.
   
 0.993
Esi_0218_0022
rRNA biogenesis protein rrp5.
   
 0.992
Esi_0003_0239
Uncharacterized protein.
   
 0.986
Esi_0006_0078
Uncharacterized protein.
   
 0.984
Esi_0029_0039
WD_REPEATS_REGION domain-containing protein.
   
 0.983
WD40-4
Conserved WD40 repeat-containing protein.
   
 0.983
Esi_0102_0055
Uncharacterized protein.
   
 0.982
Esi_0021_0005
KH domain-containing protein.
   
 0.982
Esi_0344_0036
WD_REPEATS_REGION domain-containing protein.
   
 0.981
Esi_0183_0061
U3 snoRNP-associated protein Utp7.
   
 0.980
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.