STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0158_0045Uncharacterized protein. (401 aa)    
Predicted Functional Partners:
Esi_0861_0003
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
   0.764
Esi_0000_0321
Uncharacterized protein.
   
 0.712
Esi_0206_0003
Nuclear cap-binding protein subunit 2.
    
  0.699
Esi_0063_0073
Uncharacterized protein.
   
 0.674
Esi_0304_0006
Poly(Rc) binding protien (Partial).
   
 0.659
Esi_0140_0052
RNA-binding protein 1.
   
 0.642
Esi_0196_0052
Uncharacterized protein.
   
 
  0.636
Esi_0274_0035
Ribosomal protein S23, component of cytosolic 80S ribosome and 40S small subunit.
   
   0.622
Esi_0155_0015
Uncharacterized protein.
   
  0.608
GRP1
Glycin-rich protein.
    
 0.591
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.