STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0176_0008Uncharacterized protein; Belongs to the CTL (choline transporter-like) family. (585 aa)    
Predicted Functional Partners:
Esi_0353_0021
Solute:Sodium symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.527
Esi_0353_0031
Solute:Sodium symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.527
Esi_0180_0009
Putative 3-ketoacyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
  0.504
Esi_0134_0004
HTTM domain-containing protein.
     
 0.411
Esi_0207_0012
Fatty acid desaturase.
     
 0.411
Esi_0231_0023
Fatty acid desaturase.
     
 0.411
Esi_0243_0020
Beta-1,6-glucan active enzyme, family GH16.
     
 0.411
Esi_0027_0020
Uncharacterized protein.
     
 0.411
Esi_0393_0016
Fatty acid desaturase.
     
 0.411
GST-7
Glutathione S-transferase kappa.
     
 0.411
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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