STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0182_0059Cryptic tubulin; Belongs to the tubulin family. (638 aa)    
Predicted Functional Partners:
Esi_0029_0036
Spindle pole body component.
    
 0.964
Esi_0018_0065
Uncharacterized protein.
   
 0.880
Esi_0010_0082
Spindle pole body component.
   
 0.880
Esi_0010_0084
Spindle pole body component.
   
 0.880
GCP
Spindle pole body component.
   
 0.879
Esi_0008_0051
Spindle pole body component.
   
 0.879
Esi_0206_0038
Tubulin binding.
   
 0.879
Esi_0076_0081
Neural cell expressed, developmentally down-regulated 1.
    
 0.879
TUA
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
  
0.694
TUA-2
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
  
0.694
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.