STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0028_0100DEAD box helicase. (865 aa)    
Predicted Functional Partners:
Esi_0162_0016
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
0.979
Esi_0189_0043
RNA-binding protein, putative.
   
 0.977
Esi_0006_0024
SAP domain-containing protein.
   
 0.974
Esi_0014_0188
Uncharacterized protein.
   
 0.972
Esi_0048_0084
Uncharacterized protein.
   
 0.968
Esi_0054_0097
Uncharacterized protein.
   
 0.965
Esi_0113_0005
Uncharacterized protein.
   
 0.959
Esi_0004_0127
Uncharacterized protein.
   
 0.959
Esi_0111_0090
WD_REPEATS_REGION domain-containing protein.
    
 0.939
MGO
Mago nashi.
   
 0.926
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.