HBS1 protein (Ectocarpus siliculosus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

HBS1

HBS1, eRF3-like GTPase involved in mRNA''no-go decay. (793 aa)

Predicted Functional Partners:

Esi_0134_0067

0.993

Esi_0349_0018

0.991

Esi_0141_0007

0.990

Esi_0003_0012

0.989

Esi_0571_0004

0.989

Esi_0210_0040

0.989

Esi_0008_0064

0.982

Esi_0027_0009

0.967

Esi_0100_0022

0.967

Esi_0073_0071

0.951

Your Current Organism:

Ectocarpus siliculosus

NCBI taxonomy Id: 2880
Other names: E. siliculosus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Esi_0003_0012	Esi_0027_0009	D7FVT2	D7FUB0	RNase_PH domain-containing protein.	Uncharacterized protein.	0.988
Esi_0003_0012	Esi_0100_0022	D7FVT2	D8LC92	RNase_PH domain-containing protein.	Uncharacterized protein.	0.987
Esi_0003_0012	Esi_0134_0067	D7FVT2	D7FJJ9	RNase_PH domain-containing protein.	Similar to exosome component 6.	0.999
Esi_0003_0012	Esi_0141_0007	D7FVT2	D8LF37	RNase_PH domain-containing protein.	S1 motif domain-containing protein.	0.999
Esi_0003_0012	Esi_0210_0040	D7FVT2	D8LIC3	RNase_PH domain-containing protein.	S1 domain-containing protein.	0.999
Esi_0003_0012	Esi_0349_0018	D7FVT2	D7FYR5	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
Esi_0003_0012	Esi_0571_0004	D7FVT2	D7G4N5	RNase_PH domain-containing protein.	3'-5'-exoribonuclease/ RNA binding.	0.999
Esi_0003_0012	HBS1	D7FVT2	D8LL19	RNase_PH domain-containing protein.	HBS1, eRF3-like GTPase involved in mRNA''no-go decay.	0.989
Esi_0008_0064	Esi_0073_0071	D7G6W7	D7G6B0	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	KH type-2 domain-containing protein.	0.954
Esi_0008_0064	HBS1	D7G6W7	D8LL19	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	HBS1, eRF3-like GTPase involved in mRNA''no-go decay.	0.982
Esi_0027_0009	Esi_0003_0012	D7FUB0	D7FVT2	Uncharacterized protein.	RNase_PH domain-containing protein.	0.988
Esi_0027_0009	Esi_0134_0067	D7FUB0	D7FJJ9	Uncharacterized protein.	Similar to exosome component 6.	0.987
Esi_0027_0009	Esi_0141_0007	D7FUB0	D8LF37	Uncharacterized protein.	S1 motif domain-containing protein.	0.986
Esi_0027_0009	Esi_0210_0040	D7FUB0	D8LIC3	Uncharacterized protein.	S1 domain-containing protein.	0.993
Esi_0027_0009	Esi_0349_0018	D7FUB0	D7FYR5	Uncharacterized protein.	RNase_PH domain-containing protein.	0.991
Esi_0027_0009	Esi_0571_0004	D7FUB0	D7G4N5	Uncharacterized protein.	3'-5'-exoribonuclease/ RNA binding.	0.987
Esi_0027_0009	HBS1	D7FUB0	D8LL19	Uncharacterized protein.	HBS1, eRF3-like GTPase involved in mRNA''no-go decay.	0.967
Esi_0073_0071	Esi_0008_0064	D7G6B0	D7G6W7	KH type-2 domain-containing protein.	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.954
Esi_0073_0071	HBS1	D7G6B0	D8LL19	KH type-2 domain-containing protein.	HBS1, eRF3-like GTPase involved in mRNA''no-go decay.	0.951
Esi_0100_0022	Esi_0003_0012	D8LC92	D7FVT2	Uncharacterized protein.	RNase_PH domain-containing protein.	0.987