STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0370_0029Predicted tubulin-tyrosin ligase. (445 aa)    
Predicted Functional Partners:
TIC
CHloroplast inner membrane protein TIC 21.
    
  0.614
Esi_0051_0120
Uncharacterized protein.
    
  0.614
Esi_0117_0066
Radical_SAM domain-containing protein.
    
 0.456
Esi_0124_0028
FAD_binding_3 domain-containing protein.
    
 0.456
Esi_0161_0035
Radical_SAM domain-containing protein.
    
 0.456
Esi_0207_0020
Radical_SAM domain-containing protein.
    
 0.456
Esi_0003_0092
LRR-GTPase of the ROCO family.
    
 0.456
GPAT
Glycerol-3-phosphate O-acyltransferase.
    
 0.456
Esi_0456_0012
Serine/threonine-specific protein kinase-like protein.
    
 0.456
PK-21
N/a.
    
 0.456
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.