STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0053_0021Uncharacterized protein. (582 aa)    
Predicted Functional Partners:
Esi_0399_0016
Uncharacterized protein.
    
 0.979
Esi_0021_0090
Vps53_N domain-containing protein.
   
 0.974
Esi_0069_0043
Similar to fat-free protein.
   
 0.971
Rab6
Rab6, RAB family GTPase.
    
 0.886
Esi_0043_0022
FAD dependent oxidoreductase.
 
      0.823
Esi_0080_0075
Uncharacterized protein.
   
 0.800
Esi_0346_0017
Uncharacterized protein.
    
 
 0.793
Esi_0395_0004
Uncharacterized protein.
    
 0.792
SNR4
Soluble NSF Attachment Protein (SNAP) Receptor (SNARE); Belongs to the syntaxin family.
    
 0.779
Esi_0246_0030
Cog4 domain-containing protein.
   
 
 0.770
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.