STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0056_0103Uncharacterized protein. (450 aa)    
Predicted Functional Partners:
Esi_0185_0042
DEAD box helicase similar to CG7922-PA.
    
 0.999
Esi_0018_0144
Fanconi anemia, complementation group I.
    
 0.989
Esi_0040_0067
Uncharacterized protein.
  
 
 0.982
Esi_0058_0001
Uncharacterized protein.
    
 0.982
Esi_0040_0114
NTF2 domain-containing protein.
    
 0.977
Esi_0008_0155
Uncharacterized protein.
    
 0.974
Esi_0105_0023
ERCC4 domain-containing protein.
    
 0.966
Esi_0041_0124
Uncharacterized protein.
    
 0.966
Esi_0070_0117
NPL4 domain-containing protein.
    
 0.966
Esi_0021_0144
ATP-dependent RNA helicase, putative.
    
 0.935
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.