STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0006_0020CTLH domain-containing protein. (474 aa)    
Predicted Functional Partners:
Esi_0078_0013
CRA domain-containing protein.
   
 
 0.830
Esi_0234_0044
Uncharacterized protein.
    
 
 0.788
Esi_0047_0091
Uncharacterized protein.
    
 
 0.788
Esi_0065_0103
Uncharacterized protein.
   
 
 0.768
Esi_0023_0143
WD_REPEATS_REGION domain-containing protein.
   
 
 0.768
Esi_0023_0144
WD_REPEATS_REGION domain-containing protein.
   
 
 0.768
Esi_0186_0022
DEAD box helicase; Belongs to the DEAD box helicase family.
    
   0.685
Esi_0130_0036
Yippee domain-containing protein.
   
 
 0.573
Esi_0004_0208
Protein yippee-like; Belongs to the yippee family.
   
 
 0.573
Esi_0014_0114
PRA1 family protein.
    
 
 0.441
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.