STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0007_0059Uncharacterized protein. (106 aa)    
Predicted Functional Partners:
Esi_0150_0070
Uncharacterized protein.
   
 
 0.992
rpl27
50S ribosomal protein L27, chloroplastic.
   
 
 0.988
rps12
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits.
   
 
 0.983
Esi_0009_0106
Uncharacterized protein.
   
 
 0.983
Esi_0227_0053
Uncharacterized protein.
   
 
 0.982
Esi_0091_0057
Mitochondrial ribosomal protein L46 isoform 2.
   
 
 0.982
Esi_0000_0053
Uncharacterized protein.
   
 
 0.979
Esi_0008_0244
L51_S25_CI-B8 domain-containing protein.
   
 
 0.978
rpl36
50S ribosomal protein L36, chloroplastic.
   
 
 0.975
Esi_0149_0074
Uncharacterized protein.
   
 
 0.973
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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