STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0078_0058ANK_REP_REGION domain-containing protein. (704 aa)    
Predicted Functional Partners:
Esi_0048_0043
Protein trm112, putative.
   
 0.937
Esi_0065_0117
Uncharacterized protein.
   
 0.937
Esi_0324_0024
Similar to WD repeat domain 36.
   
    0.761
Esi_0201_0039
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
   0.685
Esi_0138_0011
Brix domain containing 1.
   
    0.659
Esi_0409_0022
Nucleotide binding protein, putative.
   
 
 0.656
Esi_0079_0075
Uncharacterized protein.
   
  
 0.646
Esi_0073_0067
Uncharacterized protein.
   
    0.630
Esi_0196_0038
tRNA (Guanine-n(7)-)-methyltransferase complex subunit, putative.
   
  
 0.618
Esi_0082_0004
Uncharacterized protein.
   
 
 0.613
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.