STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_2926Putative enoyl-CoA hydratase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the enoyl-CoA hydratase/isomerase family. (269 aa)    
Predicted Functional Partners:
BBta_7640
Putative acetyl-CoA acetyltransferase; (phbA/atoB/paaJ-like); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.774
BBta_1089
Putative Non-ribosomal peptide synthase; Amino acid adenylation; modular protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.767
BBta_3576
Short chain enoyl-CoA hydratase; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic.
  
     0.765
BBta_7118
Putative acyl-CoA dehydrogenase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
 
 0.751
hbdA
3-hydroxyacyl-CoA dehydrogenase; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic.
 
 0.731
BBta_3579
acyl-CoA dehydrogenase; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic.
  
 0.689
pimF
3-hydroxyacyl-CoA dehydrogenase; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Belongs to the enoyl-CoA hydratase/isomerase family.
 
0.686
BBta_0817
fadJ/fadB-like; 3-hydroxyacyl-CoA dehydrogenase; enoyl-CoA hydratase/epimerase/isomerase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the enoyl-CoA hydratase/isomerase family.
 
0.667
BBta_2927
Putative acyl-CoA ligase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.658
BBta_2925
Putative oxidoreductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
  
 0.644
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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