STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_4201Putative exported protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane. (835 aa)    
Predicted Functional Partners:
BBta_3056
Putative penicillin-binding protein; (mrcA-like); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
0.951
BBta_7653
Putative penicillin-binding protein pbpC/mrcB-like protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
 
 
0.950
BBta_4103
Putative Serine-type D-Ala-D-Ala carboxypeptidase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the peptidase S11 family.
     
 0.918
ftsI
Division-specific transpeptidase, penicillin-binding protein; Evidence: Function of strongly homologous gene.
 
 
 
 0.865
ftsW
Essential cell division protein (stabilizes FtsZ ring); Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 5 : Inner membrane protein; Belongs to the SEDS family.
  
   
 0.790
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
   
 0.772
murA-2
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
   
 0.720
BBta_4202
Putative N-acetylmuramoyl-L-alanine amidase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.712
BBta_4409
Putative peptidoglycan-binding LysM; Peptidase M23/M37 family (NlpD/LppB-like); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.707
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
   
 0.695
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.