STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_5093Vanillin synthase / trans-feruloyl-CoA hydratase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic. (263 aa)    
Predicted Functional Partners:
BBta_7093
trans-feruloyl-CoA hydratase / vanillin synthase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 
0.903
BBta_0910
Evidence: Similar to previously reported genes of unknown function.
     
  0.900
BBta_7385
Evidence: Similar to previously reported genes of unknown function.
     
  0.900
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
 0.816
metH
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.816
BBta_0633
Putative cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
 0.814
metC-3
O-acetylhomoserine sulfhydrolase; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic.
   
 
 0.806
BBta_2188
Methionine synthase (B12-independent); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
     
 0.804
metC
O-acetylhomoserine sulfhydrolase; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic.
   
 
  0.804
BBta_5267
Homocysteine methyltransferase (Methionine synthase); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
     
 0.804
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.