STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_5414Putative nitrate ABC transporter (permease protein) (ntrB-like protein); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein. (279 aa)    
Predicted Functional Partners:
BBta_5413
Putative nitrate ABC transporter (ATP-binding protein) (ntrC/D-like protein); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
 
 
 0.996
BBta_5415
Putative nitrate ABC transporter (Substrate-binding protein) (ntrA-like protein); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.991
nrtC
ABC transporter ATP-binding protein; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic.
 
 0.983
nrtA
ABC transporter nitrate-binding protein (nrtA); Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic.
 
 
 0.982
nasA
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.957
nrtB
Nitrate transport permease protein (nrtB); Evidence: Function of strongly homologous gene; Localization: 11 : Membrane.
  
  
 
0.909
napA
Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
    
 0.903
napB
Periplasmic nitrate reductase subunit NapB; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
     
  0.900
cynS
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
 
   
 0.890
BBta_4138
Putative nitrate transporter component, nrtA; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 9 : Periplasmic.
 
  
 0.811
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.