STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_5888Putative carboxymethylenebutenolidase(Dienelactone hydrolase; DLH); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic. (250 aa)    
Predicted Functional Partners:
BBta_5141
Putative alcohol dehydrogenase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
  
 
 0.917
BBta_5889
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
       0.752
BBta_5886
Hypothetical protein; TPR repeat; Evidence: Similar to previously reported genes of unknown function.
 
  
 0.682
BBta_5887
Hypothetical protein; DUF59 domain; Evidence: Similar to previously reported genes of unknown function.
       0.655
BBta_2303
Putative carboxymethylenebutenolidase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.518
BBta_5915
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
  
     0.515
BBta_5756
Hypothetical protein; Nucleotide-binding domain; Evidence: Similar to previously reported genes of unknown function.
  
  
 0.476
BBta_5901
Hypothetical protein; TPR repeat domain; Evidence: Similar to previously reported genes of unknown function.
  
  
 0.435
BBta_5898
Hypothetical protein; NifZ domain; Evidence: Similar to previously reported genes of unknown function.
  
     0.430
BBta_4503
Putative carboxymethylenebutenolidase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.422
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.