STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gfaGlutathione-dependent formaldehyde-activating enzyme; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family. (187 aa)    
Predicted Functional Partners:
mxaF
Methanol dehydrogenase large subunit; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 5 : Inner membrane protein.
 
  
 0.970
adhC
Alcohol dehydrogenase class III; Localization: 2 : Cytoplasmic; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.970
fghA
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
    
 0.919
adh
Alcohol dehydrogenase; Localization: 2 : Cytoplasmic; Evidence: Function of strongly homologous gene.
    
 0.915
soxG
Sarcosine oxidase, gamma subunit; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic.
     
  0.900
soxA
Sarcosine oxidase, alpha subunit; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic.
     
  0.900
soxD
Sarcosine oxidase, delta subunit; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic.
     
  0.900
soxB
Sarcosine oxidase, beta subunit; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic.
     
  0.900
BBta_5969
Putative cytochrome c protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.860
BBta_5951
Amino acid ABC transporter substrate-binding protein, PAAT family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; TC 3.A.1.3.-.
 
   
 0.651
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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