STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY21942.1Serpin (serine proteinase inhibitor); Belongs to the serpin family. (417 aa)    
Predicted Functional Partners:
ABY23636.1
Serine protease, trypsin family.
 
 
 0.583
ABY23330.1
Metallopeptidase, M13 family.
    
 0.552
ABY21941.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.545
ABY21783.1
Secretory serine protease.
   
 0.510
ABY22641.1
Secretory serine protease.
   
 0.510
ABY22643.1
Secretory serine protease.
   
 0.510
ABY22644.1
Secretory serine protease.
   
 0.510
ABY22777.1
Secretory serine protease.
   
 0.510
ABY22982.1
Serine protease, trypsin family; Partial, C-terminus.
   
 0.510
ABY22983.1
Serine protease, trypsin family; Partial, N-terminus.
   
 0.510
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.