Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY22167.1 | cysS | RSal33209_0413 | RSal33209_0411 | Isoamylase; Belongs to the glycosyl hydrolase 13 family. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.788 |
ABY22167.1 | trmH | RSal33209_0413 | RSal33209_0412 | Isoamylase; Belongs to the glycosyl hydrolase 13 family. | 23S rRNA methyltransferase TrmH, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.778 |
ABY22639.1 | ABY25036.1 | RSal33209_0896 | RSal33209_3324 | Cystathionine beta-synthase. | Cysteine synthase. | 0.823 |
ABY22639.1 | ABY25037.1 | RSal33209_0896 | RSal33209_3325 | Cystathionine beta-synthase. | Serine acetyltransferase. | 0.979 |
ABY22639.1 | cysS | RSal33209_0896 | RSal33209_0411 | Cystathionine beta-synthase. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.857 |
ABY23202.1 | cysS | RSal33209_1466 | RSal33209_0411 | threonyl-tRNA synthetase. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.818 |
ABY23202.1 | leuS | RSal33209_1466 | RSal33209_1940 | threonyl-tRNA synthetase. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.709 |
ABY23202.1 | serS | RSal33209_1466 | RSal33209_3225 | threonyl-tRNA synthetase. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.776 |
ABY23202.1 | thrS | RSal33209_1466 | RSal33209_2012 | threonyl-tRNA synthetase. | threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.913 |
ABY23202.1 | valS | RSal33209_1466 | RSal33209_3261 | threonyl-tRNA synthetase. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner. | 0.698 |
ABY25036.1 | ABY22639.1 | RSal33209_3324 | RSal33209_0896 | Cysteine synthase. | Cystathionine beta-synthase. | 0.823 |
ABY25036.1 | ABY25037.1 | RSal33209_3324 | RSal33209_3325 | Cysteine synthase. | Serine acetyltransferase. | 0.998 |
ABY25036.1 | cysS | RSal33209_3324 | RSal33209_0411 | Cysteine synthase. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.916 |
ABY25037.1 | ABY22639.1 | RSal33209_3325 | RSal33209_0896 | Serine acetyltransferase. | Cystathionine beta-synthase. | 0.979 |
ABY25037.1 | ABY25036.1 | RSal33209_3325 | RSal33209_3324 | Serine acetyltransferase. | Cysteine synthase. | 0.998 |
ABY25037.1 | cysS | RSal33209_3325 | RSal33209_0411 | Serine acetyltransferase. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.947 |
cysS | ABY22167.1 | RSal33209_0411 | RSal33209_0413 | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Isoamylase; Belongs to the glycosyl hydrolase 13 family. | 0.788 |
cysS | ABY22639.1 | RSal33209_0411 | RSal33209_0896 | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Cystathionine beta-synthase. | 0.857 |
cysS | ABY23202.1 | RSal33209_0411 | RSal33209_1466 | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | threonyl-tRNA synthetase. | 0.818 |
cysS | ABY25036.1 | RSal33209_0411 | RSal33209_3324 | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Cysteine synthase. | 0.916 |
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