Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY22527.1 | ABY23558.1 | RSal33209_0780 | RSal33209_1825 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Argininosuccinate lyase. | 0.846 |
ABY22527.1 | argB | RSal33209_0780 | RSal33209_0779 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.999 |
ABY22527.1 | argC | RSal33209_0780 | RSal33209_0777 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.999 |
ABY22527.1 | argF | RSal33209_0780 | RSal33209_0781 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.995 |
ABY22527.1 | argG | RSal33209_0780 | RSal33209_0783 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.979 |
ABY22527.1 | argH | RSal33209_0780 | RSal33209_0784 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Argininosuccinate lyase. | 0.966 |
ABY22527.1 | argJ | RSal33209_0780 | RSal33209_0778 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Arginine biosynthesis bifunctional protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.999 |
ABY22527.1 | argR | RSal33209_0780 | RSal33209_0782 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Arginine repressor; Regulates arginine biosynthesis genes. | 0.969 |
ABY22527.1 | carA | RSal33209_0780 | RSal33209_1964 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.408 |
ABY22527.1 | carB | RSal33209_0780 | RSal33209_1963 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Carbamoyl-phosphate synthase large subunit. | 0.591 |
ABY23558.1 | ABY22527.1 | RSal33209_1825 | RSal33209_0780 | Argininosuccinate lyase. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.846 |
ABY23558.1 | argB | RSal33209_1825 | RSal33209_0779 | Argininosuccinate lyase. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.825 |
ABY23558.1 | argC | RSal33209_1825 | RSal33209_0777 | Argininosuccinate lyase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.845 |
ABY23558.1 | argF | RSal33209_1825 | RSal33209_0781 | Argininosuccinate lyase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.820 |
ABY23558.1 | argG | RSal33209_1825 | RSal33209_0783 | Argininosuccinate lyase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.993 |
ABY23558.1 | argH | RSal33209_1825 | RSal33209_0784 | Argininosuccinate lyase. | Argininosuccinate lyase. | 0.929 |
ABY23558.1 | argJ | RSal33209_1825 | RSal33209_0778 | Argininosuccinate lyase. | Arginine biosynthesis bifunctional protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.787 |
ABY23558.1 | argR | RSal33209_1825 | RSal33209_0782 | Argininosuccinate lyase. | Arginine repressor; Regulates arginine biosynthesis genes. | 0.665 |
ABY23558.1 | carA | RSal33209_1825 | RSal33209_1964 | Argininosuccinate lyase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.646 |
ABY23558.1 | carB | RSal33209_1825 | RSal33209_1963 | Argininosuccinate lyase. | Carbamoyl-phosphate synthase large subunit. | 0.672 |
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