STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY22777.1Secretory serine protease. (206 aa)    
Predicted Functional Partners:
ABY23636.1
Serine protease, trypsin family.
  
     0.769
ABY25257.1
Hypothetical protein.
    
 0.711
ABY24086.1
Hypothetical membrane protein.
  
     0.652
ABY22736.1
endo-beta-N-acetylglucosaminidase.
  
   
 0.606
ABY22776.1
Trypsin-like serine protease.
 
    
0.594
dnaK
Chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.576
ABY24267.1
Putative acyl carrier protein.
  
     0.557
ABY24161.1
Carboxypeptidase T precursor.
  
     0.522
ABY21942.1
Serpin (serine proteinase inhibitor); Belongs to the serpin family.
   
 0.510
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
   0.468
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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