Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY22001.1 | ABY22405.1 | RSal33209_0245 | RSal33209_0658 | Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family. | Aspartate aminotransferase. | 0.833 |
ABY22001.1 | ABY22886.1 | RSal33209_0245 | RSal33209_1148 | Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family. | Aspartate/alanine aminotransferase. | 0.833 |
ABY22001.1 | ABY23128.1 | RSal33209_0245 | RSal33209_1391 | Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family. | 2-oxoglutarate dehydrogenase E1 component. | 0.995 |
ABY22001.1 | ABY23359.1 | RSal33209_0245 | RSal33209_1623 | Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family. | NAD-specific glutamate dehydrogenase. | 0.800 |
ABY22001.1 | leuA | RSal33209_0245 | RSal33209_1593 | Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.469 |
ABY22405.1 | ABY22001.1 | RSal33209_0658 | RSal33209_0245 | Aspartate aminotransferase. | Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family. | 0.833 |
ABY22405.1 | ABY22886.1 | RSal33209_0658 | RSal33209_1148 | Aspartate aminotransferase. | Aspartate/alanine aminotransferase. | 0.904 |
ABY22405.1 | ABY23128.1 | RSal33209_0658 | RSal33209_1391 | Aspartate aminotransferase. | 2-oxoglutarate dehydrogenase E1 component. | 0.845 |
ABY22405.1 | ABY23359.1 | RSal33209_0658 | RSal33209_1623 | Aspartate aminotransferase. | NAD-specific glutamate dehydrogenase. | 0.901 |
ABY22405.1 | ABY24906.1 | RSal33209_0658 | RSal33209_3189 | Aspartate aminotransferase. | Amino-acid acetyltransferase; Belongs to the acetyltransferase family. | 0.900 |
ABY22405.1 | argJ | RSal33209_0658 | RSal33209_0778 | Aspartate aminotransferase. | Arginine biosynthesis bifunctional protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.909 |
ABY22799.1 | ABY22886.1 | RSal33209_1061 | RSal33209_1148 | Branched-chain amino acid aminotransferase. | Aspartate/alanine aminotransferase. | 0.909 |
ABY22799.1 | ilvD | RSal33209_1061 | RSal33209_1042 | Branched-chain amino acid aminotransferase. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.994 |
ABY22799.1 | leuA | RSal33209_1061 | RSal33209_1593 | Branched-chain amino acid aminotransferase. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.987 |
ABY22886.1 | ABY22001.1 | RSal33209_1148 | RSal33209_0245 | Aspartate/alanine aminotransferase. | Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family. | 0.833 |
ABY22886.1 | ABY22405.1 | RSal33209_1148 | RSal33209_0658 | Aspartate/alanine aminotransferase. | Aspartate aminotransferase. | 0.904 |
ABY22886.1 | ABY22799.1 | RSal33209_1148 | RSal33209_1061 | Aspartate/alanine aminotransferase. | Branched-chain amino acid aminotransferase. | 0.909 |
ABY22886.1 | ABY23128.1 | RSal33209_1148 | RSal33209_1391 | Aspartate/alanine aminotransferase. | 2-oxoglutarate dehydrogenase E1 component. | 0.845 |
ABY22886.1 | ABY23359.1 | RSal33209_1148 | RSal33209_1623 | Aspartate/alanine aminotransferase. | NAD-specific glutamate dehydrogenase. | 0.901 |
ABY22886.1 | ABY24556.1 | RSal33209_1148 | RSal33209_2832 | Aspartate/alanine aminotransferase. | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.904 |
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