STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EI16_11635Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (738 aa)    
Predicted Functional Partners:
EI16_03505
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.797
EI16_03065
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.791
EI16_09095
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.669
EI16_07770
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.633
EI16_07930
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.630
EI16_03185
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.611
EI16_11150
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.549
EI16_11640
Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
EI16_05965
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.512
EI16_07280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.508
Your Current Organism:
Hydrogenovibrio marinus
NCBI taxonomy Id: 28885
Other names: DSM 11271, H. marinus, Hydrogenivibrio marinus, JCM 7688, strain MH-110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.