STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI21201.1Sensory box histidine kinase; Identified by match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229. (465 aa)    
Predicted Functional Partners:
ACI21526.1
Two-component system sensory histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
 
 
 0.949
ACI20871.1
Two component system histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
  
   0.880
ACI22070.1
LssE protein; Identified by match to protein family HMM PF00563.
 
 
 0.863
ACI20317.1
Hamp domain/gaf domain/hd domain protein; Identified by match to protein family HMM PF01590; match to protein family HMM PF01966.
 
 
 0.860
ACI21896.1
Diguanylate cyclase; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.
 
  
 
 0.841
ACI20644.1
Response regulator receiver; Identified by match to protein family HMM PF00072.
 
 
 0.820
ACI20472.1
Alkaline phosphatase synthesis sensor protein PhoR; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229.
  
 
 0.775
ACI21237.1
HD domain protein; Identified by match to protein family HMM PF01590; match to protein family HMM PF01966.
 
 
 0.746
ACI21489.1
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072.
 
 0.683
ACI20646.1
Sensor histidine kinase, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
 
  
   0.670
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.