STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI20591.1Cysteine desulfurase; Identified by match to protein family HMM PF00266. (368 aa)    
Predicted Functional Partners:
ACI20738.1
4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate synthesis protein ThiF; Identified by match to protein family HMM PF00899; match to protein family HMM PF05237.
   
 0.984
ACI21690.1
Molybdopterin biosynthesis protein MoeB; Identified by match to protein family HMM PF00899; match to protein family HMM PF05237.
   
 0.984
ACI21259.1
Identified by match to protein family HMM PF01206; Belongs to the sulfur carrier protein TusA family.
   
 0.979
ACI21739.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01206; Belongs to the sulfur carrier protein TusA family.
   
 0.979
selD
Selenide, water dikinase; Identified by match to protein family HMM PF02769; match to protein family HMM TIGR00476.
    
 0.920
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.910
ACI20920.1
Identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; Belongs to the HesB/IscA family.
 
  
 0.865
ACI20258.1
Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738.
  
  
 0.864
ACI21970.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01206; match to protein family HMM TIGR03527; Belongs to the sulfur carrier protein TusA family.
   
 
 0.807
ACI20225.1
Conserved domain protein; Identified by match to protein family HMM PF01206; Belongs to the sulfur carrier protein TusA family.
   
 
 0.807
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.