STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_056330Endoplasmic reticulum, protein Pkr1. (175 aa)    
Predicted Functional Partners:
PENO1_056340
Cullin homology; Belongs to the cullin family.
 
      0.707
PENO1_094000
Uncharacterized protein.
   
  0.546
PENO1_092220
Major sperm protein.
   
  0.521
PENO1_048060
t-SNARE.
    
  0.486
PENO1_063870
Small GTPase superfamily, Ras type.
    
  0.432
PENO1_046690
Small GTPase superfamily, Ras type.
    
  0.432
PENO1_045130
Small GTPase superfamily, Rho type.
    
  0.432
PENO1_035720
FAD dependent oxidoreductase.
    
  0.432
PENO1_055020
Small GTPase superfamily, Rho type.
    
  0.432
PENO1_016590
Small GTPase superfamily, Rho type.
    
  0.432
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.