STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1C896_EMIHUUncharacterized protein; Belongs to the DEAD box helicase family. (397 aa)    
Predicted Functional Partners:
R1E0C4_EMIHU
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
  
 
0.901
R1CME4_EMIHU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.897
R1BH43_EMIHU
Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 
 0.881
R1CHH6_EMIHU
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.848
R1BIV2_EMIHU
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.847
R1BWM0_EMIHU
Eukaryotic translation initiation factor 3 subunit B.
   
 
 0.843
R1D9R0_EMIHU
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 
 0.833
R1DCP6_EMIHU
Uncharacterized protein.
   
 0.805
R1E135_EMIHU
MIF4G domain-containing protein.
   
 0.805
R1G675_EMIHU
Uncharacterized protein.
   
 0.805
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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