STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1CV43_EMIHUHist_deacetyl domain-containing protein. (170 aa)    
Predicted Functional Partners:
R1C025_EMIHU
PHD-type domain-containing protein.
   
 
 0.682
R1E706_EMIHU
MRG domain-containing protein.
    
 0.629
R1ECW4_EMIHU
Histone deacetylase 1.
  
 
 
 0.622
R1DV38_EMIHU
Histone deacetylase RpdA/Rpd3.
  
 
 
 0.620
R1BY95_EMIHU
WD_REPEATS_REGION domain-containing protein.
   
 0.618
R1CA86_EMIHU
WD_REPEATS_REGION domain-containing protein.
   
 0.618
R1DR43_EMIHU
WD_REPEATS_REGION domain-containing protein.
   
 0.618
R1CC99_EMIHU
SET domain-containing protein.
   
 0.613
R1EN59_EMIHU
SET domain-containing protein.
   
 0.613
R1CUJ3_EMIHU
Uncharacterized protein.
    
 0.601
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.