STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1DDT6_EMIHUSpo0B-associated GTPase. (262 aa)    
Predicted Functional Partners:
rpl27
50S ribosomal protein L27, chloroplastic.
  
 
 0.861
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.792
R1EN15_EMIHU
50S ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.792
R1DUS7_EMIHU
Uncharacterized protein.
   
 
 0.774
rpl21
50S ribosomal protein L21, chloroplastic; This protein binds to 23S rRNA.
  
 
 0.720
R1FPZ0_EMIHU
Uncharacterized protein.
  
 
 0.720
R1DMK8_EMIHU
Uncharacterized protein.
    
   0.704
R1BHH6_EMIHU
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.689
R1E2R6_EMIHU
Ribosomal_L11 domain-containing protein.
  
 
 0.689
R1FXR7_EMIHU
50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.689
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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