R1DZQ6_EMIHU protein (Emiliania huxleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

R1DZQ6_EMIHU

ANK_REP_REGION domain-containing protein. (314 aa)

Predicted Functional Partners:

R1E2Y1_EMIHU

0.597

R1B746_EMIHU

0.566

R1B750_EMIHU

0.566

R1E629_EMIHU

0.513

R1DPU4_EMIHU

0.512

R1E3V4_EMIHU

0.512

R1F1N3_EMIHU

0.512

R1EA95_EMIHU

0.475

R1CW80_EMIHU

0.469

R1DLF3_EMIHU

0.469

Your Current Organism:

Emiliania huxleyi

NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R1B746_EMIHU	R1CW80_EMIHU	R1B746	R1CW80	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.591
R1B746_EMIHU	R1DLF3_EMIHU	R1B746	R1DLF3	Uncharacterized protein.	SER_THR_PHOSPHATASE domain-containing protein.	0.591
R1B746_EMIHU	R1DPU4_EMIHU	R1B746	R1DPU4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.553
R1B746_EMIHU	R1DZQ6_EMIHU	R1B746	R1DZQ6	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.566
R1B746_EMIHU	R1E2Y1_EMIHU	R1B746	R1E2Y1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.451
R1B746_EMIHU	R1E3V4_EMIHU	R1B746	R1E3V4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.553
R1B746_EMIHU	R1E629_EMIHU	R1B746	R1E629	Uncharacterized protein.	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.652
R1B746_EMIHU	R1EA95_EMIHU	R1B746	R1EA95	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.587
R1B746_EMIHU	R1F1N3_EMIHU	R1B746	R1F1N3	Uncharacterized protein.	Protein kinase domain-containing protein.	0.553
R1B750_EMIHU	R1CW80_EMIHU	R1B750	R1CW80	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.591
R1B750_EMIHU	R1DLF3_EMIHU	R1B750	R1DLF3	Uncharacterized protein.	SER_THR_PHOSPHATASE domain-containing protein.	0.591
R1B750_EMIHU	R1DPU4_EMIHU	R1B750	R1DPU4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.553
R1B750_EMIHU	R1DZQ6_EMIHU	R1B750	R1DZQ6	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.566
R1B750_EMIHU	R1E2Y1_EMIHU	R1B750	R1E2Y1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.451
R1B750_EMIHU	R1E3V4_EMIHU	R1B750	R1E3V4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.553
R1B750_EMIHU	R1E629_EMIHU	R1B750	R1E629	Uncharacterized protein.	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.652
R1B750_EMIHU	R1EA95_EMIHU	R1B750	R1EA95	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.587
R1B750_EMIHU	R1F1N3_EMIHU	R1B750	R1F1N3	Uncharacterized protein.	Protein kinase domain-containing protein.	0.553
R1CW80_EMIHU	R1B746_EMIHU	R1CW80	R1B746	Serine/threonine-protein phosphatase.	Uncharacterized protein.	0.591
R1CW80_EMIHU	R1B750_EMIHU	R1CW80	R1B750	Serine/threonine-protein phosphatase.	Uncharacterized protein.	0.591