R1E126_EMIHU protein (Emiliania huxleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

R1E126_EMIHU

Uncharacterized protein. (284 aa)

Predicted Functional Partners:

R1FX93_EMIHU

0.632

R1DM49_EMIHU

0.575

R1BBC7_EMIHU

0.521

R1DGC3_EMIHU

0.521

R1EG44_EMIHU

0.521

R1EGG2_EMIHU

0.521

R1FPJ0_EMIHU

0.494

R1BIY8_EMIHU

0.458

R1BRM2_EMIHU

0.458

R1CAZ6_EMIHU

0.458

Your Current Organism:

Emiliania huxleyi

NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R1BBC7_EMIHU	R1BIY8_EMIHU	R1BBC7	R1BIY8	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Heat shock protein 90.	0.595
R1BBC7_EMIHU	R1BRM2_EMIHU	R1BBC7	R1BRM2	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	HATPase_c domain-containing protein.	0.595
R1BBC7_EMIHU	R1CAZ6_EMIHU	R1BBC7	R1CAZ6	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Heat shock protein 90.	0.595
R1BBC7_EMIHU	R1DM49_EMIHU	R1BBC7	R1DM49	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.730
R1BBC7_EMIHU	R1E126_EMIHU	R1BBC7	R1E126	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Uncharacterized protein.	0.521
R1BBC7_EMIHU	R1FPJ0_EMIHU	R1BBC7	R1FPJ0	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Sigma70_r4 domain-containing protein.	0.573
R1BBC7_EMIHU	R1FX93_EMIHU	R1BBC7	R1FX93	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Chaperone DnaK; Belongs to the heat shock protein 70 family.	0.738
R1BIY8_EMIHU	R1BBC7_EMIHU	R1BIY8	R1BBC7	Heat shock protein 90.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.595
R1BIY8_EMIHU	R1DGC3_EMIHU	R1BIY8	R1DGC3	Heat shock protein 90.	Co-chaperone GrpE, mitochondrial.	0.595
R1BIY8_EMIHU	R1DM49_EMIHU	R1BIY8	R1DM49	Heat shock protein 90.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.736
R1BIY8_EMIHU	R1E126_EMIHU	R1BIY8	R1E126	Heat shock protein 90.	Uncharacterized protein.	0.458
R1BIY8_EMIHU	R1EG44_EMIHU	R1BIY8	R1EG44	Heat shock protein 90.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.595
R1BIY8_EMIHU	R1EGG2_EMIHU	R1BIY8	R1EGG2	Heat shock protein 90.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.595
R1BIY8_EMIHU	R1FPJ0_EMIHU	R1BIY8	R1FPJ0	Heat shock protein 90.	Sigma70_r4 domain-containing protein.	0.429
R1BIY8_EMIHU	R1FX93_EMIHU	R1BIY8	R1FX93	Heat shock protein 90.	Chaperone DnaK; Belongs to the heat shock protein 70 family.	0.696
R1BRM2_EMIHU	R1BBC7_EMIHU	R1BRM2	R1BBC7	HATPase_c domain-containing protein.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.595
R1BRM2_EMIHU	R1CAZ6_EMIHU	R1BRM2	R1CAZ6	HATPase_c domain-containing protein.	Heat shock protein 90.	0.904
R1BRM2_EMIHU	R1DGC3_EMIHU	R1BRM2	R1DGC3	HATPase_c domain-containing protein.	Co-chaperone GrpE, mitochondrial.	0.595
R1BRM2_EMIHU	R1DM49_EMIHU	R1BRM2	R1DM49	HATPase_c domain-containing protein.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.736
R1BRM2_EMIHU	R1E126_EMIHU	R1BRM2	R1E126	HATPase_c domain-containing protein.	Uncharacterized protein.	0.458