STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1E416_EMIHUUncharacterized protein. (1067 aa)    
Predicted Functional Partners:
R1CZE3_EMIHU
Uncharacterized protein.
   
 
 0.956
R1EHD6_EMIHU
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
 0.943
R1FLF2_EMIHU
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
 0.943
R1C8P8_EMIHU
TruB_N domain-containing protein.
   
 
 0.834
R1CZL2_EMIHU
tRNA pseudouridine synthase.
   
 
 0.834
R1ETN0_EMIHU
PUA domain-containing protein.
   
 
 0.834
R1F567_EMIHU
PUA domain-containing protein.
   
 
 0.834
R1BDP8_EMIHU
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 
 0.725
R1FD31_EMIHU
CS domain-containing protein.
   
 
 0.719
R1E6G5_EMIHU
SRP40_C domain-containing protein.
   
    0.610
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
Server load: low (30%) [HD]