STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1E929_EMIHUUncharacterized protein. (328 aa)    
Predicted Functional Partners:
Rab5b-2
Rab5b, rab family GTPase.
    
 0.657
Rab5L-2
Rab family GTPase.
    
 0.657
Rab5a
Rab5a, rab family GTPase.
    
 0.657
Rab5L-1
Rab5L, rab family GTPase.
    
 0.657
Rab20
Rab20, rab family GTPase.
    
 0.657
IFT27
IFT27, ras superfamily GTPase.
    
 0.657
Rab50
Rab50, rab family GTPase.
    
 0.657
VPS29
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.599
R1EIX3_EMIHU
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.599
R1DE25_EMIHU
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.584
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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