STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1FIQ6_EMIHUUncharacterized protein. (215 aa)    
Predicted Functional Partners:
R1EFY2_EMIHU
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.757
R1BFZ6_EMIHU
PHD-type domain-containing protein.
    
 0.701
R1ET98_EMIHU
SGF29 C-terminal domain-containing protein.
   
 0.656
R1DAW2_EMIHU
TFIIF_beta domain-containing protein.
   
 0.648
R1DYH6_EMIHU
TFIIF_beta domain-containing protein.
   
 0.648
R1C763_EMIHU
Myb-like domain-containing protein.
   
 0.638
R1FLG2_EMIHU
SANT domain-containing protein.
   
 0.638
R1D462_EMIHU
RPOLD domain-containing protein.
   
 0.618
R1DHL1_EMIHU
RPOLD domain-containing protein.
   
 0.618
R1BD52_EMIHU
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.616
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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