STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABL64203.1PFAM: DsrE family protein; KEGG: cch:Cag_1951 DsrF protein. (129 aa)    
Predicted Functional Partners:
ABL64202.1
PFAM: DsrE family protein; KEGG: cch:Cag_1952 DsrE protein.
 
 0.999
ABL64204.1
PFAM: DsrH family protein; KEGG: cte:CT0857 DsrH protein.
 
 0.999
ABL64197.1
PFAM: DsrC family protein; KEGG: cch:Cag_1957 sulfite reductase, dissimilatory-type, gamma subunit.
 
 
 0.943
ABL66132.1
KEGG: mma:MM3292 hypothetical protein.
  
 
 0.845
ABL64199.1
KEGG: plt:Plut_0037 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region.
 
     0.844
ABL64198.1
KEGG: plt:Plut_0036 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region.
 
     0.800
ABL64200.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cch:Cag_1954 iron-sulfur cluster-binding protein, GltD family.
 
   
 0.690
ABL64207.1
Putative sulfite reductase-associated electron transfer protein DsrK; KEGG: plt:Plut_0045 DsrK protein.
 
   
 0.670
ABL64201.1
KEGG: cte:CT2246 hypothetical protein.
       0.625
ABL64208.1
Putative sulfite reductase-associated electron transfer protein DsrJ; KEGG: cte:CT2242 cytochrome DsrJ.
 
     0.600
Your Current Organism:
Chlorobium phaeobacteroides DSM 266
NCBI taxonomy Id: 290317
Other names: C. phaeobacteroides DSM 266, Chlorobium phaeobacteroides DSMZ 266(T), Chlorobium phaeobacteroides str. DSM 266, Chlorobium phaeobacteroides strain DSM 266
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